Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like | SAMN04489864_10148 | Not Available | - | 47599 - 48096 | 18635.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_10149 | Not Available | + | 48229 - 48789 | 21605.7 |
| fecr protein | SAMN04489864_10150 | Not Available | + | 48838 - 50010 | 44981.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10151 | Not Available | + | 50089 - 53508 | 126242.0 |
| starch-binding associating with outer membrane | SAMN04489864_10152 | Not Available | + | 53520 - 54953 | 53347.4 |
| protein of unknown function | SAMN04489864_10153 | Not Available | + | 54956 - 55717 | 28198.9 |
| thioredoxin-like | SAMN04489864_10154 | Not Available | + | 55728 - 56885 | 44771.4 |
| tatd dnase family protein | SAMN04489864_10155 | Not Available | + | 57052 - 57714 | 24737.3 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN04489864_10156 | Not Available | + | 57707 - 58501 | 28777.5 |
| hypothetical protein | SAMN04489864_10157 | Not Available | + | 58568 - 58876 | 11767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.