Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_101570 | Not Available | + | 630224 - 631573 | 51853.3 |
| hypothetical protein | SAMN04489864_101571 | Not Available | + | 631646 - 633184 | 56348.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04489864_101572 | Not Available | + | 633217 - 633702 | 17941.3 |
| hypothetical protein | SAMN04489864_101573 | Not Available | + | 633716 - 634075 | 13337.3 |
| hypothetical protein | SAMN04489864_101574 | Not Available | - | 634141 - 634584 | 16138.6 |
| hypothetical protein | SAMN04489864_101575 | Not Available | + | 634686 - 634817 | 4806.03 |
| spi protease inhibitor | SAMN04489864_101576 | Not Available | + | 634875 - 635117 | 8928.81 |
| Trna-ile | Not Available | Not Available | + | 638135 - 638212 | Not Available |
| Trna-ala | Not Available | Not Available | + | 638230 - 638306 | Not Available |
| acyl-[acyl-carrier-protein] desaturase | SAMN04489864_1027 | Not Available | + | 641812 - 642792 | 37813.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.