Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04489864_101540 | Not Available | + | 597768 - 598277 | 19164.4 |
| hypothetical protein | SAMN04489864_101541 | Not Available | + | 598279 - 598902 | 24413.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04489864_101542 | Not Available | + | 598956 - 599804 | 32059.9 |
| ferrochelatase | SAMN04489864_101543 | Not Available | + | 599806 - 600819 | 38580.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04489864_101544 | Not Available | - | 600816 - 602027 | 45718.2 |
| udp-glucose dehydrogenase | SAMN04489864_101545 | Not Available | + | 602094 - 603410 | 48240.1 |
| dtdp-glucose 4,6-dehydratase | SAMN04489864_101546 | Not Available | + | 603407 - 604396 | 37410.0 |
| udp-glucose 4-epimerase | SAMN04489864_101547 | Not Available | + | 604396 - 605412 | 37490.7 |
| hypothetical protein | SAMN04489864_101548 | Not Available | + | 605422 - 605985 | 21782.0 |
| dtdp-glucose 4,6-dehydratase | SAMN04489864_101549 | Not Available | + | 605985 - 607037 | 39892.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.