Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04489864_101530 | Not Available | - | 587697 - 590153 | 93836.7 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04489864_101531 | Not Available | + | 590280 - 591467 | 43183.0 |
| acetyl esterase/lipase | SAMN04489864_101532 | Not Available | + | 591511 - 592452 | 34502.2 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04489864_101533 | Not Available | + | 592555 - 593595 | 39261.8 |
| hypothetical protein | SAMN04489864_101534 | Not Available | + | 593595 - 594005 | 14507.5 |
| dna-binding transcriptional regulator, acrr family | SAMN04489864_101535 | Not Available | + | 594005 - 594580 | 22084.7 |
| hypothetical protein | SAMN04489864_101536 | Not Available | + | 594711 - 594821 | 4079.95 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04489864_101537 | Not Available | + | 594976 - 596439 | 55299.5 |
| hypothetical protein | SAMN04489864_101538 | Not Available | + | 596436 - 596843 | 15443.5 |
| putative auto-transporter adhesin, head gin domain | SAMN04489864_101539 | Not Available | - | 596922 - 597638 | 25084.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.