Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_101510 | Not Available | - | 560019 - 560699 | 25151.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04489864_101511 | Not Available | - | 560719 - 562176 | 53725.9 |
| cytochrome c | SAMN04489864_101512 | Not Available | - | 562194 - 562574 | 13259.1 |
| sugar phosphate isomerase/epimerase | SAMN04489864_101513 | Not Available | - | 562591 - 563643 | 39473.3 |
| predicted dehydrogenase | SAMN04489864_101514 | Not Available | - | 563649 - 564803 | 42233.8 |
| choline dehydrogenase | SAMN04489864_101515 | Not Available | - | 564872 - 566572 | 63583.3 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04489864_101516 | Not Available | - | 566599 - 567267 | 24564.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN04489864_101517 | Not Available | + | 567523 - 568467 | 35370.1 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04489864_101518 | Not Available | + | 568532 - 569260 | 27271.2 |
| phospholipase/carboxylesterase | SAMN04489864_101519 | Not Available | - | 569308 - 570084 | 29308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.