Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase family s41 | SAMN04489864_101480 | Not Available | - | 530655 - 531116 | 17291.7 |
| hypothetical protein | SAMN04489864_101481 | Not Available | - | 531230 - 531628 | 15453.8 |
| membrane protein implicated in regulation of membrane protease activity | SAMN04489864_101482 | Not Available | + | 531759 - 532202 | 16260.7 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04489864_101483 | Not Available | + | 532209 - 533165 | 35230.8 |
| hypothetical protein | SAMN04489864_101484 | Not Available | - | 533245 - 534003 | 27380.2 |
| hypothetical protein | SAMN04489864_101485 | Not Available | + | 534619 - 534825 | 7993.04 |
| lipid a 3-o-deacylase (pagl) | SAMN04489864_101486 | Not Available | - | 534822 - 535931 | 41846.2 |
| hypothetical protein | SAMN04489864_101487 | Not Available | - | 535932 - 536903 | 36762.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04489864_101488 | Not Available | + | 536972 - 537799 | 31862.9 |
| hypothetical protein | SAMN04489864_101489 | Not Available | + | 538290 - 538706 | 15000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.