Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04489864_101450 | Not Available | + | 496911 - 497879 | 36804.5 |
| predicted dehydrogenase | SAMN04489864_101451 | Not Available | + | 497933 - 499255 | 49622.8 |
| thiamine biosynthesis lipoprotein | SAMN04489864_101452 | Not Available | + | 499263 - 500270 | 37190.0 |
| calcineurin-like phosphoesterase | SAMN04489864_101453 | Not Available | + | 500272 - 501270 | 37045.8 |
| galactose mutarotase | SAMN04489864_101454 | Not Available | + | 501305 - 502174 | 33417.6 |
| phospholipase c | SAMN04489864_101455 | Not Available | + | 502195 - 504567 | 88844.8 |
| putative acetyltransferase | SAMN04489864_101456 | Not Available | + | 504576 - 505061 | 17808.6 |
| hypothetical protein | SAMN04489864_101457 | Not Available | - | 505053 - 506246 | 46482.7 |
| predicted arabinose efflux permease, mfs family | SAMN04489864_101458 | Not Available | + | 506409 - 507644 | 45339.5 |
| response regulator receiver domain-containing protein | SAMN04489864_101459 | Not Available | + | 507694 - 508053 | 13787.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.