Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04489864_101440 | Not Available | - | 487295 - 487822 | 20114.0 |
| signal peptidase ii | SAMN04489864_101441 | Not Available | - | 487916 - 488518 | 22733.9 |
| rna polymerase-binding transcription factor dksa | SAMN04489864_101442 | Not Available | - | 488518 - 488901 | 14319.0 |
| isoleucyl-trna synthetase | SAMN04489864_101443 | Not Available | - | 488908 - 492285 | 127561.0 |
| hypothetical protein | SAMN04489864_101444 | Not Available | + | 492399 - 492551 | 5500.23 |
| hypothetical protein | SAMN04489864_101445 | Not Available | + | 492562 - 492825 | 9516.12 |
| hypothetical protein | SAMN04489864_101446 | Not Available | - | 492832 - 495189 | 87485.8 |
| diacylglycerol kinase (atp) | SAMN04489864_101447 | Not Available | + | 495323 - 495670 | 12361.6 |
| dna replication and repair protein reco | SAMN04489864_101448 | Not Available | + | 495671 - 496396 | 28165.3 |
| Trna-val | Not Available | Not Available | + | 496517 - 496594 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.