Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldb | SAMN04489864_101430 | Not Available | - | 477701 - 478741 | 40519.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04489864_101431 | Not Available | + | 478766 - 479458 | 25507.7 |
| nh(3)-dependent nad(+) synthetase | SAMN04489864_101432 | Not Available | + | 479495 - 481138 | 61264.9 |
| signal peptidase ii | SAMN04489864_101433 | Not Available | - | 481145 - 481648 | 18569.5 |
| apolipoprotein n-acyltransferase | SAMN04489864_101434 | Not Available | - | 481654 - 483270 | 60890.2 |
| short c-terminal domain-containing protein | SAMN04489864_101435 | Not Available | - | 483277 - 483861 | 22247.7 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04489864_101436 | Not Available | - | 483882 - 484598 | 26721.4 |
| seryl-trna synthetase | SAMN04489864_101437 | Not Available | + | 484638 - 485909 | 47450.5 |
| hypothetical protein | SAMN04489864_101438 | Not Available | - | 485998 - 486309 | 11872.9 |
| hypothetical protein | SAMN04489864_101439 | Not Available | - | 486444 - 487148 | 26396.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.