Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex delta subunit | SAMN04489864_101410 | Not Available | + | 459672 - 460208 | 19714.0 |
| f-type h+-transporting atpase subunit alpha | SAMN04489864_101411 | Not Available | + | 460248 - 461819 | 56416.2 |
| atp synthase f1 subcomplex gamma subunit | SAMN04489864_101412 | Not Available | + | 461863 - 462744 | 32161.9 |
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN04489864_101413 | Not Available | + | 462798 - 463595 | 30256.2 |
| hypothetical protein | SAMN04489864_101414 | Not Available | + | 463694 - 463909 | 7695.38 |
| holliday junction endonuclease ruvc | SAMN04489864_101415 | Not Available | - | 463975 - 464541 | 20687.5 |
| hypothetical protein | SAMN04489864_101416 | Not Available | + | 464584 - 465561 | 37569.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04489864_101417 | Not Available | + | 465539 - 466675 | 42449.7 |
| peptide/nickel transport system permease protein | SAMN04489864_101418 | Not Available | + | 466683 - 467819 | 42067.1 |
| hypothetical protein | SAMN04489864_101419 | Not Available | + | 468379 - 469053 | 25460.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.