Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein gldl | SAMN04489864_101400 | Not Available | + | 446666 - 447475 | 28974.5 |
| gliding motility-associated protein gldm | SAMN04489864_101401 | Not Available | + | 447514 - 449052 | 55475.3 |
| gliding motility associated protien gldn | SAMN04489864_101402 | Not Available | + | 449059 - 449991 | 34933.4 |
| excinuclease abc subunit c | SAMN04489864_101403 | Not Available | - | 449988 - 451799 | 69819.8 |
| penicillin-binding protein 1a | SAMN04489864_101404 | Not Available | - | 451822 - 454047 | 83024.1 |
| tetratricopeptide repeat-containing protein | SAMN04489864_101405 | Not Available | - | 454054 - 456855 | 107016.0 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN04489864_101406 | Not Available | + | 456888 - 457127 | 9037.04 |
| atp synthase f0 subcomplex a subunit | SAMN04489864_101407 | Not Available | + | 457584 - 458744 | 42770.8 |
| atp synthase f0 subcomplex c subunit | SAMN04489864_101408 | Not Available | + | 458782 - 458997 | 6730.44 |
| atp synthase f0 subcomplex b subunit | SAMN04489864_101409 | Not Available | + | 459070 - 459564 | 18506.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.