Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN04489864_10128 | Not Available | + | 29246 - 30502 | 45509.0 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN04489864_10129 | Not Available | - | 30495 - 32075 | 59672.5 |
| hypothetical protein | SAMN04489864_10130 | Not Available | - | 32161 - 33450 | 49840.7 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04489864_10131 | Not Available | + | 33790 - 34569 | 28794.4 |
| nicotinate-nucleotide adenylyltransferase | SAMN04489864_10132 | Not Available | - | 34574 - 35146 | 21807.6 |
| guanylate kinase | SAMN04489864_10133 | Not Available | - | 35154 - 35723 | 21705.9 |
| tigr00255 family protein | SAMN04489864_10134 | Not Available | - | 35744 - 36607 | 32768.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04489864_10135 | Not Available | - | 36669 - 37406 | 27467.4 |
| hypothetical protein | SAMN04489864_10136 | Not Available | + | 37479 - 38195 | 27049.7 |
| ribonuclease-3 | SAMN04489864_10137 | Not Available | - | 38203 - 38925 | 27478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.