Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein motb | SAMN04489864_101380 | Not Available | + | 424495 - 425358 | 32197.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04489864_101381 | Not Available | - | 425367 - 425921 | 21220.0 |
| protein of unknown function | SAMN04489864_101382 | Not Available | - | 425923 - 426225 | 11627.8 |
| tetratricopeptide repeat-containing protein | SAMN04489864_101383 | Not Available | - | 426256 - 428067 | 69693.7 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04489864_101384 | Not Available | + | 428250 - 430196 | 74335.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04489864_101385 | Not Available | + | 430211 - 431884 | 64050.1 |
| two-component system, ompr family, response regulator mtra | SAMN04489864_101386 | Not Available | + | 431887 - 432576 | 26319.1 |
| hypothetical protein | SAMN04489864_101387 | Not Available | - | 432605 - 433483 | 33433.6 |
| hypothetical protein | SAMN04489864_101388 | Not Available | - | 433511 - 434776 | 47759.3 |
| magnesium chelatase subunit i | SAMN04489864_101389 | Not Available | - | 434773 - 436248 | 55606.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.