Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN04489864_1174 | Not Available | - | 4361896 - 4362519 | 22586.1 |
| dihydrofolate reductase | SAMN04489864_1175 | Not Available | - | 4362527 - 4363078 | 20638.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_1176 | Not Available | - | 4363225 - 4363728 | 19446.1 |
| dna-binding transcriptional regulator, arsr family | SAMN04489864_1177 | Not Available | - | 4363725 - 4364045 | 12496.2 |
| alpha/beta hydrolase family protein | SAMN04489864_1178 | Not Available | - | 4364193 - 4365035 | 31633.3 |
| fic family protein | SAMN04489864_1179 | Not Available | - | 4365105 - 4366070 | 37548.1 |
| hypothetical protein | SAMN04489864_11710 | Not Available | - | 4366067 - 4366708 | 23846.2 |
| hypothetical protein | SAMN04489864_11711 | Not Available | - | 4366844 - 4367374 | 20033.1 |
| hypothetical protein | SAMN04489864_11712 | Not Available | - | 4367599 - 4368075 | 18187.7 |
| Trna-pseudo | Not Available | Not Available | + | 4368133 - 4368213 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.