Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04489864_101370 | Not Available | + | 412622 - 413161 | 20454.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_101371 | Not Available | + | 413256 - 413834 | 22506.3 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04489864_101372 | Not Available | + | 413902 - 414867 | 35527.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_101373 | Not Available | + | 414882 - 418541 | 136652.0 |
| susd family protein | SAMN04489864_101374 | Not Available | + | 418552 - 420030 | 55529.9 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04489864_101375 | Not Available | + | 420033 - 421427 | 52022.6 |
| protein of unknown function | SAMN04489864_101376 | Not Available | + | 421432 - 422772 | 47677.5 |
| hypothetical protein | SAMN04489864_101377 | Not Available | + | 423145 - 423387 | 8947.22 |
| hypothetical protein | SAMN04489864_101378 | Not Available | + | 423405 - 423803 | 15398.9 |
| tigr02453 family protein | SAMN04489864_101379 | Not Available | + | 423822 - 424484 | 25850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.