Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN04489864_11567 | Not Available | - | 4319047 - 4320093 | 38909.5 |
| galactokinase | SAMN04489864_11568 | Not Available | + | 4320161 - 4321312 | 42641.9 |
| spou rrna methylase family protein | SAMN04489864_11569 | Not Available | + | 4321309 - 4321839 | 19803.9 |
| xanthine dehydrogenase yagr molybdenum-binding subunit | SAMN04489864_11570 | Not Available | - | 4321953 - 4324076 | 76140.4 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN04489864_11571 | Not Available | - | 4324076 - 4325059 | 35520.6 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN04489864_11572 | Not Available | - | 4325056 - 4325676 | 22540.3 |
| glutamate synthase (nadph/nadh) small chain | SAMN04489864_11573 | Not Available | - | 4325853 - 4327319 | 53554.5 |
| glutamate synthase (nadph/nadh) large chain | SAMN04489864_11574 | Not Available | - | 4327320 - 4331831 | 165594.0 |
| transaldolase | SAMN04489864_11576 | Not Available | + | 4332410 - 4333066 | 22992.0 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | SAMN04489864_11577 | Not Available | - | 4333172 - 4333669 | 18417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.