Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN04489864_11527 | Not Available | - | 4271971 - 4272852 | 31579.4 |
| gtp-binding protein lepa | SAMN04489864_11528 | Not Available | - | 4272871 - 4274658 | 66641.8 |
| alpha-1,2-mannosidase, putative | SAMN04489864_11529 | Not Available | - | 4274684 - 4277971 | 124220.0 |
| copper homeostasis protein | SAMN04489864_11530 | Not Available | - | 4277982 - 4278722 | 26933.7 |
| asparaginase | SAMN04489864_11531 | Not Available | - | 4278754 - 4279785 | 37057.7 |
| carbon-nitrogen hydrolase | SAMN04489864_11532 | Not Available | - | 4279822 - 4280631 | 31702.1 |
| methionine aminotransferase | SAMN04489864_11533 | Not Available | - | 4280666 - 4281871 | 45450.2 |
| hypothetical protein | SAMN04489864_11534 | Not Available | + | 4281935 - 4282705 | 28730.1 |
| uncharacterized membrane protein ycap, duf421 family | SAMN04489864_11535 | Not Available | + | 4282764 - 4283477 | 26971.6 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04489864_11536 | Not Available | + | 4283577 - 4283882 | 11186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.