Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase (gdp) | SAMN04489864_11517 | Not Available | - | 4261992 - 4263083 | 40686.7 |
| arabinose-5-phosphate isomerase | SAMN04489864_11518 | Not Available | - | 4263105 - 4264070 | 34627.6 |
| atp-dependent dna helicase recq | SAMN04489864_11519 | Not Available | + | 4264159 - 4266348 | 82136.9 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN04489864_11520 | Not Available | + | 4266422 - 4267231 | 29043.4 |
| outer membrane protein ompa | SAMN04489864_11521 | Not Available | - | 4267233 - 4269125 | 70435.2 |
| organic radical activating enzyme | SAMN04489864_11522 | Not Available | - | 4269209 - 4269832 | 23396.0 |
| hypothetical protein | SAMN04489864_11523 | Not Available | + | 4270065 - 4270835 | 28061.8 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | SAMN04489864_11524 | Not Available | + | 4270843 - 4271151 | 11554.9 |
| pin domain-containing protein | SAMN04489864_11525 | Not Available | - | 4271156 - 4271590 | 16544.2 |
| hypothetical protein | SAMN04489864_11526 | Not Available | - | 4271590 - 4271877 | 10999.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.