Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_1157 | Not Available | - | 4251755 - 4252870 | 43418.1 |
| protein of unknown function | SAMN04489864_1158 | Not Available | - | 4252872 - 4253969 | 43498.5 |
| mfs transporter, nhs family, xanthosine permease | SAMN04489864_1159 | Not Available | - | 4253985 - 4255373 | 51984.3 |
| hypothetical protein | SAMN04489864_11510 | Not Available | - | 4255437 - 4256051 | 22899.3 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN04489864_11511 | Not Available | - | 4256106 - 4257074 | 33703.6 |
| electron transfer flavoprotein beta subunit | SAMN04489864_11512 | Not Available | - | 4257104 - 4257841 | 26428.7 |
| tpr repeat-containing protein | SAMN04489864_11513 | Not Available | + | 4257919 - 4258254 | 12950.9 |
| chromate transporter | SAMN04489864_11514 | Not Available | + | 4258280 - 4259479 | 43845.5 |
| replicative dna helicase | SAMN04489864_11515 | Not Available | - | 4259499 - 4261067 | 58401.8 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04489864_11516 | Not Available | + | 4261204 - 4261995 | 28827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.