Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme, r subunit | SAMN04489864_11478 | Not Available | + | 4237707 - 4240781 | 119025.0 |
| type i restriction enzyme m protein | SAMN04489864_11479 | Not Available | + | 4240781 - 4242397 | 60992.6 |
| type i restriction enzyme, s subunit | SAMN04489864_11480 | Not Available | + | 4242390 - 4243676 | 49034.3 |
| atpase family associated with various cellular activities (aaa) | SAMN04489864_11481 | Not Available | + | 4243657 - 4245603 | 75303.2 |
| mcrbc 5-methylcytosine restriction system component | SAMN04489864_11482 | Not Available | + | 4245611 - 4246993 | 54130.3 |
| hypothetical protein | SAMN04489864_1151 | Not Available | + | 4247450 - 4247689 | 9425.49 |
| hypothetical protein | SAMN04489864_1153 | Not Available | + | 4247842 - 4248723 | 33572.2 |
| protein of unknown function | SAMN04489864_1154 | Not Available | + | 4248892 - 4249425 | 19128.8 |
| citrate synthase | SAMN04489864_1155 | Not Available | + | 4249478 - 4250764 | 48065.1 |
| uncharacterized conserved protein yece, duf72 family | SAMN04489864_1156 | Not Available | + | 4250871 - 4251758 | 34185.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.