Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_101360 | Not Available | + | 403717 - 404940 | 45981.4 |
| hypothetical protein | SAMN04489864_101361 | Not Available | - | 404894 - 404983 | 3411.15 |
| cytochrome c oxidase subunit 2 | SAMN04489864_101362 | Not Available | + | 405002 - 406231 | 46104.3 |
| cytochrome c oxidase subunit 1 | SAMN04489864_101363 | Not Available | + | 406247 - 408133 | 70889.0 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN04489864_101364 | Not Available | + | 408224 - 409291 | 40227.9 |
| protoheme ix farnesyltransferase | SAMN04489864_101365 | Not Available | + | 409294 - 410202 | 33847.4 |
| cytochrome c oxidase subunit 3 | SAMN04489864_101366 | Not Available | + | 410204 - 410779 | 21616.7 |
| cytochrome c oxidase subunit 3 | SAMN04489864_101367 | Not Available | + | 410811 - 411518 | 26893.0 |
| caa(3)-type oxidase, subunit iv | SAMN04489864_101368 | Not Available | + | 411543 - 411896 | 13642.1 |
| protein sco1/2 | SAMN04489864_101369 | Not Available | + | 411896 - 412603 | 26493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.