Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna binding domain-containing protein, excisionase family | SAMN04489864_11468 | Not Available | + | 4231286 - 4231642 | 13740.9 |
| site-specific recombinase xerd | SAMN04489864_11469 | Not Available | + | 4231639 - 4232766 | 43911.8 |
| hypothetical protein | SAMN04489864_11470 | Not Available | + | 4232769 - 4233623 | 33385.8 |
| dna binding domain-containing protein, excisionase family | SAMN04489864_11471 | Not Available | + | 4233718 - 4234062 | 13165.9 |
| hypothetical protein | SAMN04489864_11472 | Not Available | + | 4234131 - 4235333 | 47191.7 |
| mobilisation protein (mobc) | SAMN04489864_11473 | Not Available | + | 4235766 - 4236266 | 19630.1 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04489864_11474 | Not Available | - | 4236235 - 4236477 | 9000.05 |
| hypothetical protein | SAMN04489864_11475 | Not Available | + | 4236583 - 4236804 | 8195.01 |
| hypothetical protein | SAMN04489864_11476 | Not Available | + | 4236821 - 4237075 | 10036.9 |
| helix-turn-helix | SAMN04489864_11477 | Not Available | + | 4237489 - 4237707 | 8150.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.