Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_11458 | Not Available | + | 4222179 - 4222652 | 18431.2 |
| hypothetical protein | SAMN04489864_11459 | Not Available | + | 4222656 - 4223207 | 20757.4 |
| Trna-leu | Not Available | Not Available | + | 4223280 - 4223362 | Not Available |
| four helix bundle sensory module for signal transduction | SAMN04489864_11461 | Not Available | - | 4223423 - 4224094 | 25398.1 |
| putative abc transport system permease protein | SAMN04489864_11462 | Not Available | - | 4224112 - 4226646 | 93386.1 |
| putative abc transport system atp-binding protein | SAMN04489864_11463 | Not Available | - | 4226639 - 4227328 | 24604.5 |
| acyl-coa thioesterase-1 | SAMN04489864_11464 | Not Available | + | 4227432 - 4228106 | 24007.3 |
| predicted purr-regulated permease perm | SAMN04489864_11465 | Not Available | - | 4228107 - 4229234 | 41464.0 |
| sigma 54 modulation protein / s30ea ribosomal protein | SAMN04489864_11466 | Not Available | - | 4229291 - 4229608 | 11796.0 |
| trna modification gtpase | SAMN04489864_11467 | Not Available | + | 4229688 - 4231040 | 49329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.