Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | SAMN04489864_11438 | Not Available | - | 4198846 - 4200462 | 59813.0 |
| glycosyl hydrolases family 16 | SAMN04489864_11439 | Not Available | - | 4200642 - 4201517 | 33200.2 |
| pkd domain-containing protein | SAMN04489864_11440 | Not Available | - | 4201525 - 4202946 | 51588.8 |
| starch-binding associating with outer membrane | SAMN04489864_11441 | Not Available | - | 4202957 - 4204465 | 55285.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_11442 | Not Available | - | 4204474 - 4207581 | 112161.0 |
| two component regulator propeller | SAMN04489864_11443 | Not Available | + | 4207745 - 4210672 | 111434.0 |
| hypothetical protein | SAMN04489864_11444 | Not Available | - | 4210854 - 4211381 | 20371.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04489864_11445 | Not Available | - | 4211386 - 4212096 | 26645.1 |
| hypothetical protein | SAMN04489864_11446 | Not Available | - | 4212102 - 4212344 | 9588.78 |
| deoxyadenosine/deoxycytidine kinase | SAMN04489864_11447 | Not Available | - | 4212331 - 4212945 | 23783.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.