Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate glucokinase | SAMN04489864_11418 | Not Available | - | 4164950 - 4165708 | 27974.0 |
| hypothetical protein | SAMN04489864_11419 | Not Available | - | 4165776 - 4166081 | 11575.3 |
| hypothetical protein | SAMN04489864_11420 | Not Available | + | 4166163 - 4166369 | 7465.77 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04489864_11421 | Not Available | + | 4166571 - 4176281 | 329928.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04489864_11422 | Not Available | + | 4176307 - 4177326 | 37056.7 |
| wd40-like beta propeller repeat | SAMN04489864_11423 | Not Available | + | 4177338 - 4179335 | 74807.8 |
| hypothetical protein | SAMN04489864_11424 | Not Available | - | 4179401 - 4181932 | 98686.0 |
| hypothetical protein | SAMN04489864_11425 | Not Available | - | 4182151 - 4182525 | 13100.1 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04489864_11426 | Not Available | - | 4182623 - 4183345 | 27820.0 |
| trna (cmo5u34)-methyltransferase | SAMN04489864_11427 | Not Available | - | 4183348 - 4184088 | 28497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.