Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | SAMN04489864_113124 | Not Available | + | 4142137 - 4143483 | 50440.2 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04489864_113125 | Not Available | + | 4143587 - 4144138 | 20223.9 |
| hypothetical protein | SAMN04489864_113126 | Not Available | - | 4144220 - 4144840 | 22527.5 |
| aipr protein | SAMN04489864_1141 | Not Available | - | 4145363 - 4147126 | 68512.8 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN04489864_1142 | Not Available | - | 4147890 - 4149545 | 62413.5 |
| toxin syme, type i toxin-antitoxin system | SAMN04489864_1143 | Not Available | + | 4150083 - 4150229 | 5737.04 |
| protein of unknown function | SAMN04489864_1144 | Not Available | - | 4150435 - 4151055 | 22819.3 |
| hypothetical protein | SAMN04489864_1145 | Not Available | - | 4151134 - 4151949 | 31807.5 |
| hypothetical protein | SAMN04489864_1146 | Not Available | + | 4152801 - 4154114 | 49242.9 |
| 23s rrna m(6)a-1618 methyltransferase | SAMN04489864_1147 | Not Available | + | 4154114 - 4155043 | 34447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.