Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-amino acid n-acyltransferase ynca | SAMN04489864_113114 | Not Available | + | 4131865 - 4132347 | 18454.9 |
| protein of unknown function | SAMN04489864_113115 | Not Available | + | 4132344 - 4133150 | 30234.9 |
| aspartate kinase | SAMN04489864_113116 | Not Available | + | 4133152 - 4134420 | 47779.1 |
| hypothetical protein | SAMN04489864_113117 | Not Available | + | 4134432 - 4135610 | 43941.3 |
| protein of unknown function | SAMN04489864_113118 | Not Available | + | 4135783 - 4138794 | 114469.0 |
| cold-shock dna-binding protein family | SAMN04489864_113119 | Not Available | - | 4138972 - 4139169 | 7291.8 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN04489864_113120 | Not Available | - | 4139246 - 4139881 | 23559.9 |
| trypsin-like peptidase domain-containing protein | SAMN04489864_113121 | Not Available | - | 4139939 - 4141027 | 39740.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN04489864_113122 | Not Available | - | 4141029 - 4141595 | 21814.1 |
| hypothetical protein | SAMN04489864_113123 | Not Available | + | 4141834 - 4142022 | 6514.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.