Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04489864_113104 | Not Available | - | 4121160 - 4123010 | 67979.8 |
| starvation-inducible dna-binding protein | SAMN04489864_113105 | Not Available | - | 4123054 - 4123533 | 18491.3 |
| lysm repeat-containing protein | SAMN04489864_113106 | Not Available | + | 4123694 - 4124962 | 45871.8 |
| uridine kinase | SAMN04489864_113107 | Not Available | + | 4124949 - 4125587 | 24524.7 |
| 3-oxoacid coa-transferase subunit b | SAMN04489864_113108 | Not Available | - | 4125591 - 4126250 | 23225.5 |
| 3-oxoacid coa-transferase subunit a | SAMN04489864_113109 | Not Available | - | 4126270 - 4126977 | 25453.8 |
| dehydrogenase, pqq-dependent, s-gdh family | SAMN04489864_113110 | Not Available | - | 4127114 - 4128199 | 39970.0 |
| dna mismatch repair protein muts2 | SAMN04489864_113111 | Not Available | - | 4128243 - 4130612 | 89499.8 |
| protein of unknown function | SAMN04489864_113112 | Not Available | - | 4130621 - 4131097 | 18039.7 |
| hypothetical protein | SAMN04489864_113113 | Not Available | + | 4131170 - 4131850 | 25444.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.