Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-homoserine lactone (ahl) acylase pvdq | SAMN04489864_101350 | Not Available | - | 391019 - 393193 | 81620.1 |
| hypothetical protein | SAMN04489864_101351 | Not Available | - | 393201 - 393689 | 18127.6 |
| surface antigen | SAMN04489864_101352 | Not Available | - | 393748 - 394878 | 42568.6 |
| hypothetical protein | SAMN04489864_101353 | Not Available | - | 394916 - 395119 | 7969.66 |
| homospermidine synthase (spermidine-specific) | SAMN04489864_101354 | Not Available | + | 395458 - 396438 | 36940.2 |
| cytochrome c553 | SAMN04489864_101355 | Not Available | + | 396715 - 398004 | 47345.5 |
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | SAMN04489864_101356 | Not Available | + | 398051 - 401098 | 111866.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN04489864_101357 | Not Available | + | 401110 - 402582 | 55837.6 |
| protein of unknown function | SAMN04489864_101358 | Not Available | + | 402585 - 403121 | 19960.3 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04489864_101359 | Not Available | + | 403105 - 403701 | 21683.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.