Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat | SAMN04489864_11394 | Not Available | + | 4111539 - 4112195 | 23689.4 |
| hypothetical protein | SAMN04489864_11395 | Not Available | - | 4112192 - 4112413 | 8484.59 |
| protein of unknown function | SAMN04489864_11396 | Not Available | - | 4112480 - 4113763 | 49736.5 |
| threonine/homoserine efflux transporter rhta | SAMN04489864_11397 | Not Available | - | 4113878 - 4114786 | 32784.2 |
| orotidine-5'-phosphate decarboxylase | SAMN04489864_11398 | Not Available | - | 4114783 - 4115613 | 30531.4 |
| transcription termination factor rho | SAMN04489864_11399 | Not Available | + | 4115887 - 4117674 | 66482.0 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN04489864_113100 | Not Available | + | 4117674 - 4118351 | 25221.8 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN04489864_113101 | Not Available | - | 4118365 - 4118736 | 14479.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN04489864_113102 | Not Available | - | 4118777 - 4119271 | 18581.8 |
| protease-4 | SAMN04489864_113103 | Not Available | + | 4119321 - 4121093 | 64475.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.