Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11384 | Not Available | - | 4101727 - 4101930 | 7544.03 |
| hypothetical protein | SAMN04489864_11385 | Not Available | - | 4102383 - 4103057 | 26517.1 |
| immunity protein 53 | SAMN04489864_11386 | Not Available | - | 4103517 - 4103705 | 6858.08 |
| hepn domain-containing protein | SAMN04489864_11387 | Not Available | + | 4103975 - 4104646 | 25782.5 |
| Trna-leu | Not Available | Not Available | + | 4104736 - 4104822 | Not Available |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04489864_11389 | Not Available | - | 4104867 - 4105625 | 28532.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_11390 | Not Available | - | 4105659 - 4106861 | 44806.9 |
| outer membrane lipoprotein-sorting protein | SAMN04489864_11391 | Not Available | - | 4107000 - 4107650 | 24208.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04489864_11392 | Not Available | - | 4107712 - 4110264 | 94943.6 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04489864_11393 | Not Available | - | 4110466 - 4111293 | 30711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.