Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11374 | Not Available | - | 4089889 - 4090680 | 28298.8 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04489864_11375 | Not Available | - | 4090738 - 4091361 | 23959.4 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04489864_11376 | Not Available | + | 4091893 - 4092906 | 39871.1 |
| hypothetical protein | SAMN04489864_11377 | Not Available | + | 4093283 - 4093831 | 21367.4 |
| abortive infection bacteriophage resistance protein | SAMN04489864_11378 | Not Available | + | 4094564 - 4095472 | 35308.4 |
| hypothetical protein | SAMN04489864_11379 | Not Available | - | 4095501 - 4097033 | 58117.2 |
| tir domain-containing protein | SAMN04489864_11380 | Not Available | - | 4097017 - 4098426 | 54798.3 |
| hypothetical protein | SAMN04489864_11381 | Not Available | + | 4098669 - 4098866 | 7461.2 |
| hypothetical protein | SAMN04489864_11382 | Not Available | + | 4099280 - 4100689 | 53174.9 |
| hypothetical protein | SAMN04489864_11383 | Not Available | - | 4100807 - 4101388 | 23016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.