Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04489864_11364 | Not Available | + | 4081988 - 4082950 | 36120.7 |
| peptidase m60, enhancin and enhancin-like | SAMN04489864_11365 | Not Available | - | 4082975 - 4084483 | 56993.5 |
| putative membrane protein | SAMN04489864_11366 | Not Available | + | 4084704 - 4085324 | 22668.1 |
| hypothetical protein | SAMN04489864_11367 | Not Available | + | 4085396 - 4085857 | 17645.3 |
| methionine aminopeptidase, type i | SAMN04489864_11368 | Not Available | - | 4085894 - 4086658 | 27782.2 |
| hypothetical protein | SAMN04489864_11369 | Not Available | - | 4086718 - 4087212 | 18508.8 |
| hypothetical protein | SAMN04489864_11370 | Not Available | - | 4087221 - 4087784 | 20504.5 |
| thioredoxin | SAMN04489864_11371 | Not Available | - | 4087786 - 4088079 | 10998.5 |
| rhodanese-related sulfurtransferase | SAMN04489864_11372 | Not Available | - | 4088102 - 4088419 | 11363.6 |
| hydroxyacylglutathione hydrolase | SAMN04489864_11373 | Not Available | - | 4088421 - 4089809 | 51118.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.