Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN04489864_11344 | Not Available | + | 4059698 - 4060159 | 17205.6 |
| hypothetical protein | SAMN04489864_11345 | Not Available | + | 4060370 - 4060567 | 6931.79 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489864_11346 | Not Available | - | 4060572 - 4061405 | 29732.1 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04489864_11347 | Not Available | + | 4061556 - 4061897 | 12666.6 |
| nagd protein | SAMN04489864_11348 | Not Available | - | 4061908 - 4062783 | 31869.4 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN04489864_11349 | Not Available | - | 4062789 - 4064282 | 54388.7 |
| glycerol-1-phosphate dehydrogenase | SAMN04489864_11350 | Not Available | - | 4064300 - 4065655 | 49457.0 |
| peptidase family m1 | SAMN04489864_11351 | Not Available | - | 4065787 - 4069305 | 134127.0 |
| abc-type multidrug transport system, atpase component | SAMN04489864_11352 | Not Available | - | 4069311 - 4070327 | 37673.9 |
| ghkl domain-containing protein | SAMN04489864_11353 | Not Available | + | 4070340 - 4071836 | 57443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.