Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11334 | Not Available | - | 4052105 - 4052686 | 21288.4 |
| alanyl-trna synthetase | SAMN04489864_11335 | Not Available | - | 4052740 - 4055373 | 98582.4 |
| dna-binding transcriptional regulator, merr family | SAMN04489864_11336 | Not Available | + | 4055474 - 4055809 | 13073.8 |
| hypothetical protein | SAMN04489864_11337 | Not Available | - | 4055818 - 4056408 | 21760.4 |
| response regulator receiver domain-containing protein | SAMN04489864_11338 | Not Available | + | 4056868 - 4057230 | 14183.4 |
| hypothetical protein | SAMN04489864_11339 | Not Available | + | 4057285 - 4058028 | 27544.6 |
| hypothetical protein | SAMN04489864_11340 | Not Available | - | 4058041 - 4058235 | 7218.18 |
| hypothetical protein | SAMN04489864_11341 | Not Available | + | 4058380 - 4058895 | 19318.7 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04489864_11342 | Not Available | - | 4058911 - 4059135 | 8491.48 |
| hypothetical protein | SAMN04489864_11343 | Not Available | + | 4059296 - 4059673 | 14360.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.