Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | SAMN04489864_11313 | Not Available | - | 4033300 - 4033659 | 13444.4 |
| glutaryl-coa dehydrogenase | SAMN04489864_11314 | Not Available | + | 4033752 - 4034942 | 43793.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_11315 | Not Available | + | 4034987 - 4035370 | 14520.8 |
| protein of unknown function (du1801) | SAMN04489864_11316 | Not Available | + | 4035373 - 4035726 | 14083.4 |
| protein of unknown function | SAMN04489864_11317 | Not Available | + | 4035779 - 4035997 | 7802.8 |
| diaminopimelate decarboxylase | SAMN04489864_11318 | Not Available | - | 4035994 - 4037151 | 42810.0 |
| aspartate kinase | SAMN04489864_11319 | Not Available | - | 4037328 - 4038641 | 48388.3 |
| phosphoglucomutase | SAMN04489864_11320 | Not Available | + | 4038759 - 4040495 | 63306.1 |
| hypothetical protein | SAMN04489864_11321 | Not Available | + | 4040899 - 4041276 | 14312.7 |
| hypothetical protein | SAMN04489864_11322 | Not Available | + | 4041371 - 4042207 | 30852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.