Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage-related protein | SAMN04489864_1133 | Not Available | + | 4027252 - 4027602 | 13926.1 |
| helix-turn-helix | SAMN04489864_1134 | Not Available | + | 4027586 - 4027891 | 11643.0 |
| phage-related protein | SAMN04489864_1135 | Not Available | + | 4028089 - 4028448 | 14187.4 |
| helix-turn-helix | SAMN04489864_1136 | Not Available | + | 4028438 - 4028728 | 11116.4 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04489864_1137 | Not Available | + | 4029219 - 4029848 | 24732.9 |
| hypothetical protein | SAMN04489864_1138 | Not Available | + | 4030088 - 4030963 | 33838.1 |
| dihydrofolate reductase | SAMN04489864_1139 | Not Available | + | 4030999 - 4031565 | 21396.1 |
| dihydrofolate reductase | SAMN04489864_11310 | Not Available | + | 4031684 - 4032232 | 20493.5 |
| heat shock protein hsp20 | SAMN04489864_11311 | Not Available | - | 4032301 - 4032735 | 16422.3 |
| acyl-coa thioester hydrolase | SAMN04489864_11312 | Not Available | + | 4032811 - 4033293 | 18872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.