Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN04489864_101340 | Not Available | - | 376086 - 378854 | 104106.0 |
| glycine hydroxymethyltransferase | SAMN04489864_101341 | Not Available | - | 378864 - 380135 | 46310.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04489864_101342 | Not Available | + | 380632 - 382560 | 69858.1 |
| gdp-l-fucose synthase | SAMN04489864_101343 | Not Available | + | 382947 - 383882 | 34825.9 |
| hypothetical protein | SAMN04489864_101344 | Not Available | - | 384183 - 385565 | 51726.7 |
| comf family protein | SAMN04489864_101345 | Not Available | - | 385568 - 386266 | 26114.2 |
| transglutaminase-like superfamily protein | SAMN04489864_101346 | Not Available | - | 386288 - 387142 | 33053.2 |
| methyltransferase domain-containing protein | SAMN04489864_101347 | Not Available | + | 387147 - 387968 | 31437.3 |
| predicted transcriptional regulator | SAMN04489864_101348 | Not Available | + | 388175 - 388555 | 14581.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04489864_101349 | Not Available | + | 388542 - 390914 | 88080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.