Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m1 | SAMN04489864_112106 | Not Available | - | 4016080 - 4019355 | 125176.0 |
| abc-type multidrug transport system, atpase component | SAMN04489864_112107 | Not Available | - | 4019367 - 4020239 | 32282.6 |
| histidine kinase | SAMN04489864_112108 | Not Available | + | 4020441 - 4021235 | 31454.1 |
| dna-binding response regulator, lytr/algr family | SAMN04489864_112109 | Not Available | + | 4021232 - 4021939 | 27194.3 |
| hypothetical protein | SAMN04489864_112110 | Not Available | - | 4021965 - 4022132 | 6434.97 |
| acetyl esterase/lipase | SAMN04489864_112111 | Not Available | - | 4022391 - 4023323 | 34707.3 |
| integrase core domain-containing protein | SAMN04489864_112112 | Not Available | + | 4023592 - 4025136 | 59389.5 |
| dna replication protein dnac | SAMN04489864_112113 | Not Available | + | 4025156 - 4025902 | 28472.3 |
| regulatory protein, luxr family | SAMN04489864_1131 | Not Available | - | 4026039 - 4026206 | 6249.59 |
| hypothetical protein | SAMN04489864_1132 | Not Available | + | 4026520 - 4027044 | 19770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.