Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04489864_11276 | Not Available | + | 3985909 - 3986661 | 27448.0 |
| thiamine-phosphate diphosphorylase | SAMN04489864_11277 | Not Available | + | 3986665 - 3987330 | 23862.2 |
| thiazole-phosphate synthase | SAMN04489864_11278 | Not Available | + | 3987324 - 3988085 | 27099.0 |
| tyrosine lyase thih | SAMN04489864_11279 | Not Available | + | 3988091 - 3989227 | 43489.1 |
| adenylyltransferase and sulfurtransferase | SAMN04489864_11280 | Not Available | + | 3989237 - 3990256 | 37650.1 |
| hypothetical protein | SAMN04489864_11281 | Not Available | + | 3990249 - 3990875 | 23583.1 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04489864_11282 | Not Available | - | 3990872 - 3992104 | 45757.4 |
| hypothetical protein | SAMN04489864_11283 | Not Available | - | 3992212 - 3992856 | 24302.6 |
| hypothetical protein | SAMN04489864_11284 | Not Available | - | 3992958 - 3993659 | 25528.5 |
| hypothetical protein | SAMN04489864_11285 | Not Available | - | 3993656 - 3994084 | 16423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.