Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_11255 | Not Available | - | 3957038 - 3958429 | 52968.9 |
| protein of unknown function | SAMN04489864_11256 | Not Available | - | 3958450 - 3960969 | 94498.1 |
| protein of unknown function | SAMN04489864_11257 | Not Available | - | 3960988 - 3963501 | 93114.7 |
| pkd-like family protein | SAMN04489864_11258 | Not Available | - | 3963562 - 3965220 | 59165.9 |
| protein of unknown function | SAMN04489864_11259 | Not Available | - | 3965243 - 3966034 | 28843.3 |
| susd family protein | SAMN04489864_11260 | Not Available | - | 3966055 - 3967542 | 54573.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_11261 | Not Available | - | 3967547 - 3970735 | 116255.0 |
| susd family protein | SAMN04489864_11262 | Not Available | - | 3970785 - 3972116 | 48975.9 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN04489864_11263 | Not Available | - | 3972127 - 3975201 | 111243.0 |
| s-formylglutathione hydrolase frmb | SAMN04489864_11264 | Not Available | - | 3975517 - 3976335 | 31458.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.