Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_11245 | Not Available | - | 3941427 - 3942779 | 50485.6 |
| peptidase s46 | SAMN04489864_11246 | Not Available | - | 3942790 - 3944967 | 82350.6 |
| peroxiredoxin | SAMN04489864_11247 | Not Available | - | 3944974 - 3946104 | 41772.0 |
| pkd-like family protein | SAMN04489864_11248 | Not Available | - | 3946162 - 3947697 | 56038.7 |
| protein of unknown function | SAMN04489864_11249 | Not Available | - | 3947726 - 3948469 | 27501.2 |
| susd family protein | SAMN04489864_11250 | Not Available | - | 3948502 - 3949977 | 55532.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_11251 | Not Available | - | 3949964 - 3953296 | 123443.0 |
| fecr protein | SAMN04489864_11252 | Not Available | - | 3953402 - 3954529 | 42585.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_11253 | Not Available | - | 3954712 - 3955266 | 21330.9 |
| peroxiredoxin | SAMN04489864_11254 | Not Available | - | 3955238 - 3957025 | 67745.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.