Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii n-terminus | SAMN04489864_101330 | Not Available | + | 364282 - 366168 | 74137.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_101331 | Not Available | + | 366168 - 367406 | 46782.6 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04489864_101332 | Not Available | + | 367399 - 368001 | 23018.5 |
| transferase hexapeptide (six repeat-containing protein) | SAMN04489864_101333 | Not Available | + | 368003 - 368611 | 21374.9 |
| degt/dnrj/eryc1/strs aminotransferase family protein | SAMN04489864_101334 | Not Available | + | 368614 - 369756 | 41330.3 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04489864_101335 | Not Available | + | 369874 - 371817 | 72715.8 |
| hypothetical protein | SAMN04489864_101336 | Not Available | + | 372056 - 373654 | 62064.5 |
| hypothetical protein | SAMN04489864_101337 | Not Available | - | 373651 - 373815 | 5682.53 |
| hypothetical protein | SAMN04489864_101338 | Not Available | + | 374054 - 375250 | 45718.5 |
| putative endonuclease | SAMN04489864_101339 | Not Available | + | 375671 - 375973 | 11807.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.