Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04489864_111110 | Not Available | - | 3870098 - 3871690 | 58848.9 |
| chemotaxis protein methyltransferase cher | SAMN04489864_111111 | Not Available | - | 3871694 - 3872533 | 32743.4 |
| signal transduction histidine kinase | SAMN04489864_111112 | Not Available | - | 3872530 - 3875991 | 128882.0 |
| dna-binding response regulator, lytr/algr family | SAMN04489864_111113 | Not Available | - | 3876087 - 3876764 | 25439.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_111114 | Not Available | - | 3876765 - 3878273 | 57873.0 |
| hypothetical protein | SAMN04489864_111115 | Not Available | - | 3878276 - 3879124 | 31568.2 |
| histidine kinase | SAMN04489864_111116 | Not Available | - | 3879127 - 3880641 | 58750.1 |
| transcriptional regulator, spx/mgsr family | SAMN04489864_111117 | Not Available | + | 3880787 - 3881134 | 13170.9 |
| response regulator receiver domain-containing protein | SAMN04489864_111118 | Not Available | + | 3881222 - 3881611 | 14774.4 |
| hypothetical protein | SAMN04489864_111119 | Not Available | + | 3881673 - 3882425 | 28558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.