Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | SAMN04489864_11190 | Not Available | + | 3849660 - 3850037 | 14468.9 |
| l-asparaginase | SAMN04489864_11191 | Not Available | + | 3850116 - 3851132 | 37185.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04489864_11192 | Not Available | + | 3851227 - 3852642 | 51351.9 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04489864_11193 | Not Available | - | 3852646 - 3853119 | 18349.6 |
| esterase/lipase | SAMN04489864_11194 | Not Available | - | 3853116 - 3854084 | 35805.4 |
| octaprenyl-diphosphate synthase | SAMN04489864_11195 | Not Available | + | 3854172 - 3855143 | 36339.1 |
| tellurite resistance protein terc | SAMN04489864_11196 | Not Available | + | 3855143 - 3856198 | 39923.3 |
| pa domain-containing protein | SAMN04489864_11197 | Not Available | + | 3856271 - 3857752 | 53759.6 |
| cbs domain-containing protein | SAMN04489864_11198 | Not Available | - | 3857749 - 3858177 | 15633.1 |
| gh3 auxin-responsive promoter | SAMN04489864_11199 | Not Available | - | 3858240 - 3859748 | 58162.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.