Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | SAMN04489864_11160 | Not Available | - | 3820487 - 3821590 | 40308.7 |
| 23s rrna pseudouridine2605 synthase | SAMN04489864_11161 | Not Available | - | 3821623 - 3822942 | 49732.6 |
| transglycosylase slt domain-containing protein | SAMN04489864_11162 | Not Available | + | 3823139 - 3823915 | 29117.3 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN04489864_11163 | Not Available | + | 3823980 - 3825032 | 39384.4 |
| hypothetical protein | SAMN04489864_11164 | Not Available | - | 3825050 - 3825928 | 32926.5 |
| sulfate permease, sulp family | SAMN04489864_11165 | Not Available | + | 3826009 - 3827538 | 54487.2 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN04489864_11166 | Not Available | - | 3827528 - 3828727 | 43530.9 |
| excinuclease abc subunit a | SAMN04489864_11167 | Not Available | + | 3828907 - 3831750 | 105933.0 |
| predicted naringenin-chalcone synthase | SAMN04489864_11168 | Not Available | - | 3831760 - 3832854 | 40672.4 |
| methyltransferase domain-containing protein | SAMN04489864_11169 | Not Available | - | 3832809 - 3833516 | 26921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.