Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| moxr-like atpase | SAMN04489864_11150 | Not Available | - | 3810106 - 3811068 | 35423.8 |
| periplasmic chaperone for outer membrane proteins sura | SAMN04489864_11151 | Not Available | - | 3811074 - 3812435 | 51967.5 |
| hypothetical protein | SAMN04489864_11152 | Not Available | - | 3812491 - 3813090 | 22989.4 |
| hypothetical protein | SAMN04489864_11153 | Not Available | + | 3813185 - 3813691 | 18872.7 |
| xtp/ditp diphosphohydrolase | SAMN04489864_11154 | Not Available | + | 3813664 - 3814284 | 22790.2 |
| osta-like protein | SAMN04489864_11155 | Not Available | - | 3814714 - 3816762 | 76227.7 |
| trna(ile)-lysidine synthase | SAMN04489864_11156 | Not Available | + | 3816882 - 3818216 | 51202.7 |
| hypothetical protein | SAMN04489864_11157 | Not Available | + | 3818322 - 3818804 | 18756.0 |
| hypothetical protein | SAMN04489864_11158 | Not Available | + | 3818811 - 3819290 | 18062.1 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN04489864_11159 | Not Available | + | 3819341 - 3820480 | 42333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.