Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_110156 | Not Available | + | 3747293 - 3747412 | 4256.18 |
| hypothetical protein | SAMN04489864_1111 | Not Available | + | 3747413 - 3747504 | 3204.69 |
| integrase core domain-containing protein | SAMN04489864_1112 | Not Available | + | 3747620 - 3749164 | 59389.5 |
| dna replication protein dnac | SAMN04489864_1113 | Not Available | + | 3749184 - 3749930 | 28472.3 |
| pas fold-containing protein | SAMN04489864_1114 | Not Available | - | 3750052 - 3750606 | 21195.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_1115 | Not Available | + | 3750870 - 3751457 | 22946.9 |
| fecr protein | SAMN04489864_1116 | Not Available | + | 3751548 - 3752702 | 43149.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_1117 | Not Available | + | 3752806 - 3756078 | 119649.0 |
| starch-binding associating with outer membrane | SAMN04489864_1118 | Not Available | + | 3756100 - 3757548 | 53807.0 |
| fad dependent oxidoreductase | SAMN04489864_1119 | Not Available | + | 3757572 - 3759182 | 59633.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.