Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain-containing protein | SAMN04489864_110146 | Not Available | + | 3733438 - 3733998 | 20603.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_110147 | Not Available | + | 3734090 - 3737293 | 116629.0 |
| starch-binding associating with outer membrane | SAMN04489864_110148 | Not Available | + | 3737307 - 3739139 | 67716.4 |
| hypothetical protein | SAMN04489864_110149 | Not Available | + | 3739197 - 3740171 | 37221.3 |
| peptidase | SAMN04489864_110150 | Not Available | + | 3740204 - 3741226 | 38699.1 |
| hypothetical protein | SAMN04489864_110151 | Not Available | + | 3741367 - 3742788 | 53254.4 |
| glucokinase | SAMN04489864_110152 | Not Available | + | 3742824 - 3743696 | 32240.8 |
| peptidase | SAMN04489864_110153 | Not Available | + | 3743721 - 3744377 | 25112.2 |
| alpha-1,2-mannosidase, putative | SAMN04489864_110154 | Not Available | + | 3744384 - 3746675 | 85707.6 |
| Trna-ala | Not Available | Not Available | + | 3746826 - 3746899 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.