Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | SAMN04489864_110126 | Not Available | + | 3708919 - 3710103 | 45401.5 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04489864_110127 | Not Available | + | 3710260 - 3711450 | 42911.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_110128 | Not Available | + | 3711492 - 3714602 | 111565.0 |
| susd and ragb outer membrane lipoprotein | SAMN04489864_110129 | Not Available | + | 3714621 - 3716525 | 70366.4 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN04489864_110130 | Not Available | - | 3716577 - 3717662 | 38857.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN04489864_110131 | Not Available | - | 3717753 - 3719345 | 61036.9 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN04489864_110132 | Not Available | - | 3719436 - 3720770 | 50705.6 |
| fused signal recognition particle receptor | SAMN04489864_110133 | Not Available | - | 3720795 - 3721757 | 34887.1 |
| protein of unknown function | SAMN04489864_110134 | Not Available | - | 3721832 - 3721996 | 5861.15 |
| lsu ribosomal protein l33p | SAMN04489864_110135 | Not Available | - | 3722037 - 3722219 | 6984.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.